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Addition of new flammulina species via DNA, molecular characterization and phylogenetic investigation

Nadia Jabeen, A. Mubeen Lodhi, Alia Gul, Abdul Basit, Sanaa Almowallad, Adel I. Alalawy, Amnah A. Alharbi, Mohamed Sakran, Sezai Ercişli, Mohamed El-Sharnouby, Ayman El Sabagh

Cellular and molecular biology (Noisy-le-Grand, France) Cilt 70 · Sayı 10 · ss. 16–24 · 01.01.2024
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Özet

Flammulina was found frequently distributed in the District Mansehra during the present research work. The genus was ignored and not studied for prevalence previously, as F. velutipes was the exclusively reported species from the research vicinity. During the present research work, three new species were explored i-e F. hazariansis (N. J201177, N. J201178), F. solatium (N. J201188, N. J201167) and F. dwarftype (N. J201187, NJ201139) were amassed from the surrounding areas of Hazara University Mansehra. Our findings revealed that the reported species are novel, the molecular, morphological, and phylogenetic characterizations proved it. The specimens were collected from various habitats, vegetation, damp places, and forest areas with rich organic soil favor the mushroom’s growth from May to November. The species were studied for morphological characteristics like size, shape and color of the pileus, stripe, and spore size were also recorded. The species were preserved by sun and oven drying strategies. The Kit methods for molecular characterizations were used for the extraction of DNA, and for PCR, ITS4 primer was designed from conserved regions described in previous studies. The amplified PCR products were sequenced from Microgen Korea. Phylogenetic analysis of the obtained sequences was done based on the maximum likelihood method using Mega version 6.0. Our findings based on morphological and phylogenetic analysis confirmed the existence of three new species in the already described genera from the region. The area of District Mansehra is enriched with natural vegetation and can be explored for brand-spanking new species.

Anahtar kelimeler

MORPHOLOGY MOLECULAR CHARACTERIZATION New records phylogenetic analysis Agaricomycetes Flammulina

Atıf için künye

Jabeen, N., Lodhi, A. M., Gul, A., Basit, A., Almowallad, S., Alalawy, A. I., Alharbi, A. A., Sakran, M., Ercişli, S., El-Sharnouby, M., & Sabagh, A. E. (2024). Addition of new flammulina species via DNA, molecular characterization and phylogenetic investigation. Cellular and molecular biology (Noisy-le-Grand, France), 70(10), 16–24. https://doi.org/10.14715/cmb/2024.70.10.3

BibTeX
@article{jabeen2024-264919,
  author = {Jabeen, Nadia and Lodhi, A. Mubeen and Gul, Alia and Basit, Abdul and Almowallad, Sanaa and Alalawy, Adel I. and Alharbi, Amnah A. and Sakran, Mohamed and Ercişli, Sezai and El-Sharnouby, Mohamed and Sabagh, Ayman El},
  title = {Addition of new flammulina species via DNA, molecular characterization and phylogenetic investigation},
  journal = {Cellular and molecular biology (Noisy-le-Grand, France)},
  year = {2024},
  volume = {70},
  number = {10},
  pages = {16--24},
  issn = {0145-5680},
  doi = {10.14715/cmb/2024.70.10.3},
  url = {https://akademik.atauni.edu.tr/yayinlar/264919-addition-of-new-flammulina-species-via-dna-molecular-characterization-and}
}