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Makale Tam Makale Uluslararası 2020

Molecular characterization of genetic diversity and similarity centers of safflower accessions with ISSR markers

Fawad Ali, Muhammad Azhar Nadeem, Ephrem Habyarimana, Abdurrahim Yilmaz, Muhammad Amjad Nawaz, Iftikhar Hussain Khalil, Sezai Ercişli, Gyuhwa Chung, Hassan Javed Chaudhary, FAHEEM SHEHZAD BALOCH

BRAZILIAN JOURNAL OF BOTANY Cilt 43 · Sayı 1 · ss. 109–121 · 01.03.2020
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Özet

Crop genetic resources are vital inputs in crop genetic improvement. In this study, genetic diversity, population structure, and similarity centers for 131 safflower accessions obtained from 28 countries were investigated using 12 ISSR markers. A sum of 201 ISSR bands were obtained among which 188 (93.844%) were found polymorphic. Mean polymorphism information content (0.448) and diversity parameters including mean effective number of alleles (1.655), mean Shannon's information index (0.557), mean expected heterozygosity (0.354), and mean overall gene diversity (0.377) showed a good level of genetic diversity in the studied safflower materials. Model-based structure, unweighted pair-group method with arithmetic means, and principal coordinate analysis clustered all accessions into three main populations; A, B, and C and an unclassified population. Accessions originated from Asian countries like Pakistan and Israel were found most diverse. Three accessions, Pakistan-11, Israel-1, and Pakistan-26, were found most genetically distant and might be used as parental sources for genetic combinations in safflower breeding activities. Analysis of molecular variance revealed highly significant differentiation among the identified populations and population x country combinations. The results presented in this work most probably supported the hypothesis of seven similarity centers of safflower but need to be validated with further confirmed investigations. The information provided herein is expected to be helpful for the scientific community interested in safflower breeding.

Anahtar kelimeler

RAPD MOLECULAR MARKERS NATURAL-POPULATIONS FATTY-ACID-COMPOSITION POPULATION-STRUCTURE Genetic resources COLLECTION Genetic differentiation Safflower breeding CARTHAMUS-TINCTORIUS L. SEQUENCE REPEAT ISSR MORPHOLOGICAL TRAITS LINKAGE MAP GERM PLASM

Sürdürülebilir Kalkınma Amaçları

  • SKA 15: Karasal Yaşam

Atıf için künye

Ali, F., Nadeem, M. A., Habyarimana, E., Yilmaz, A., Nawaz, M. A., Khalil, I. H., Ercişli, S., Chung, G., Chaudhary, H. J., & BALOCH, F. S. (2020). Molecular characterization of genetic diversity and similarity centers of safflower accessions with ISSR markers. BRAZILIAN JOURNAL OF BOTANY, 43(1), 109–121. https://doi.org/10.1007/s40415-019-00574-7

BibTeX
@article{ali2020-264244,
  author = {Ali, Fawad and Nadeem, Muhammad Azhar and Habyarimana, Ephrem and Yilmaz, Abdurrahim and Nawaz, Muhammad Amjad and Khalil, Iftikhar Hussain and Ercişli, Sezai and Chung, Gyuhwa and Chaudhary, Hassan Javed and BALOCH, FAHEEM SHEHZAD},
  title = {Molecular characterization of genetic diversity and similarity centers of safflower accessions with ISSR markers},
  journal = {BRAZILIAN JOURNAL OF BOTANY},
  year = {2020},
  volume = {43},
  number = {1},
  pages = {109--121},
  issn = {0100-8404},
  doi = {10.1007/s40415-019-00574-7},
  url = {https://akademik.atauni.edu.tr/yayinlar/264244-molecular-characterization-of-genetic-diversity-and-similarity-centers-of}
}