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Article 2024 · 2 citations

Synthesis, spectroscopic characterization, DFT and molecular docking of N-(3-cyano-4,5,6,7-tetrahydrobenzo[b]thiophen-2-yl) naphthalene-1-sulfonamide derivatives

Ashraf, Sajda, Iqbal, Shazia, Sebhaoui, Jihad, Ozcan, Mehmet, Kim, Woonghee, Belmen, Burcu, Yesilyurt, Guldeniz, Hanashalshahaby, Essam, Zhang, Cheng, Uhlen, Mathias, Boren, Jan, Turkez, Hasan, Mardinoglu, Adil

Abstract

Liver pyruvate kinase (PKL) is a key player in controlling metabolic pathways and ATP production within the liver ' s glycolysis pathway. Since PKL modulators have been identified as a promising target for treating hepatocellular carcinoma (HCC) and non-alcoholic fatty liver disease (NAFLD), our research is centered on the development and synthesis of derivatives of N-(3-cyano-4,5,6,7-tetrahydrobenzo[b]thiophen-2-yl) naphthalene1 -sulfonamide with the aim of modulating PLK. To improve PKL specificity, we used structural analysis and modeling as a guide. Notably, compound PKL-05 became the series ' only active ingredient. DFT, Hirshfeld surface analysis, and molecular docking were used in our study to thoroughly examine the connection between compound structures and their computational functions. The global hardness and softness energy values, as well as the HOMO-LUMO energy gap value, were computed in order to forecast the chemical reactivity of this newly synthesized molecule. These energy values indicate that this molecule tends to be chemically stable and has little chemical reactivity. The results demonstrated a strong agreement between theoretical forecasts and experimental findings. In particular, PKL-05 exhibits encouraging traits that establish it as a useful starting point for additional research in the search for innovative PKL modulators to tackle the treatment issues associated with NAFLD and HCC.

Keywords
Liver pyruvate kinase Docking DFT X-ray Synthesis Hirschfield surface analysis INTERMOLECULAR INTERACTIONS X-RAY QUANTITATIVE-ANALYSIS CRYSTAL-STRUCTURE MODEL ENERGIES CRYSTALEXPLORER PROGRAM FORMS
WoS Categories
Chemistry, Physical
Sustainable Development Goals
Citation
Journal
JOURNAL OF MOLECULAR STRUCTURE
Year
2024
Volume
1312
ISSN
0022-2860
eISSN
1872-8014
DOI
10.1016/j.molstruc.2024.138470
WoS UID
WOS:001240351100001
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